sampler_MCMC_base Member List
This is the complete list of members for sampler_MCMC_base, including all inherited members.
| _chain_file (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _chain_out (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _ckpt_file (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _ckpt_stride (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _comm (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _dimension (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _L (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _output_precision (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _rank (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _rng (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _sampler_file (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _sampler_out (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _seed (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _state_file (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _state_out (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _step_count (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _sum_lklhd (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| _var_names (defined in sampler_MCMC_base) | sampler_MCMC_base | protected |
| close_streams() | sampler_MCMC_base | inline |
| find_best_fit(std::string chain_file, std::string state_file) const | sampler_MCMC_base | virtual |
| find_best_fit() const | sampler_MCMC_base | virtual |
| get_chain_state(std::vector< double > ¶meters, std::vector< double > &sample_state)=0 (defined in sampler_MCMC_base) | sampler_MCMC_base | pure virtual |
| get_likelihood_sum() (defined in sampler_MCMC_base) | sampler_MCMC_base | inline |
| get_rand() (defined in sampler_MCMC_base) | sampler_MCMC_base | inlinevirtual |
| read_checkpoint(std::string ckpt_file) | sampler_MCMC_base | virtual |
| read_checkpoint(std::istream &ckpt_in)=0 (defined in sampler_MCMC_base) | sampler_MCMC_base | pure virtual |
| reset_likelihood_sum() (defined in sampler_MCMC_base) | sampler_MCMC_base | inline |
| reset_rng_seed(int seed) (defined in sampler_MCMC_base) | sampler_MCMC_base | inlinevirtual |
| reset_sampler_step() (defined in sampler_MCMC_base) | sampler_MCMC_base | inlinevirtual |
| run_sampler(int nsteps, int thin, int refresh, int verbosity=1)=0 (defined in sampler_MCMC_base) | sampler_MCMC_base | pure virtual |
| sampler_MCMC_base(int seed, likelihood &L, std::vector< std::string > var_names, size_t dimension) (defined in sampler_MCMC_base) | sampler_MCMC_base | |
| set_chain_state(std::vector< double > parameters, std::vector< double > sample_state)=0 (defined in sampler_MCMC_base) | sampler_MCMC_base | pure virtual |
| set_checkpoint(int ckpt_stride, std::string ckpt_file) | sampler_MCMC_base | |
| set_initial_location(std::vector< double > initial_parameters)=0 (defined in sampler_MCMC_base) | sampler_MCMC_base | pure virtual |
| set_mpi_communicator(MPI_Comm comm) | sampler_MCMC_base | |
| set_output_stream(std::string chain_name, std::string state_name, std::string sampler_name, int output_precision=8) | sampler_MCMC_base | virtual |
| write_chain_header() (defined in sampler_MCMC_base) | sampler_MCMC_base | protectedvirtual |
| write_checkpoint(std::ostream &out)=0 (defined in sampler_MCMC_base) | sampler_MCMC_base | pure virtual |
| write_state()=0 (defined in sampler_MCMC_base) | sampler_MCMC_base | protectedpure virtual |
| write_state_header() (defined in sampler_MCMC_base) | sampler_MCMC_base | protectedvirtual |
| ~sampler_MCMC_base() (defined in sampler_MCMC_base) | sampler_MCMC_base | inline |